ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3qd3A1 - ECOD Domain | ECOD

ECOD/Domains/e3qd3A1

e3qd3A1

UID: 000414288

PDB

Range: A:71-358
PDB: 3QD3 chain A(all domains)
UniProt: O15530 (all domains)
Gene: PDPK1

Molecule: 3-phosphoinositide-dependent protein kinase 1

3D Structure

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Related Domains

Browse other domains in Pkinase →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupProtein kinase/SAICAR synthase/ATP-grasp(206)

HH-groupProtein kinase/SAICAR synthase/ATP-grasp(206.1)

TT-groupProtein kinase(206.1.1)

FFamilyPkinase(206.1.1.1)

Ligands

in contact, ≤ 4 Å

tert-butyl {(3R,6S)-1-[2-amino-6-(3-amino-2H-indazol-6-yl)pyrimidin-4-yl]-6-methylpiperidin-3-yl}carbamate3Q5

+ 2 additives (Glycerin, Sulfate ion)

GlycerinGOL
DrugBank DB09462
Sulfate ion

Pfam Families

PF00069Pkinase

Protein kinase domain

ClanCL0016PKinase

External Links

ECOD PDB View: 3QD3 RCSB PDB: 3QD3 PDBe: 3QD3 UniProt: O15530

Downloads

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DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.