ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4qxsF1 - ECOD Domain | ECOD

ECOD/Domains/e4qxsF1

e4qxsF1

UID: 001501360

PDB

Range: F:10-350
PDB: 4QXS chain F(all domains)
UniProt: P14324 (all domains)
Gene: FDPS

Molecule: Farnesyl pyrophosphate synthase

3D Structure

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Related Domains

Browse other domains in polyprenyl_synt →

Classification

AArchitecturealpha bundles(a.7)

XX-groupTerpenoid synthases(141)

HH-groupTerpenoid synthases(141.1)

TT-groupTerpenoid synthases(141.1.1)

FFamilypolyprenyl_synt(141.1.1.1)

Ligands

in contact, ≤ 4 Å

(2-{2-[(2S)-3-methylbutan-2-yl]-5-phenyl-1H-indol-3-yl}ethane-1,1-diyl)bis(phosphonic acid)WC1

+ 2 additives (Glycerin, Phosphate ion)

GlycerinGOL
DrugBank DB09462
Phosphate ion

Pfam Families

PF00348polyprenyl_synt

Polyprenyl synthetase

ClanCL0613Terp_synthase

External Links

ECOD PDB View: 4QXS RCSB PDB: 4QXS PDBe: 4QXS UniProt: P14324

Downloads

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DrugBank DB14523

Shown in the structure viewer. Drug annotations from DrugDomain.