ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3b1uA1 - ECOD Domain | ECOD

ECOD/Domains/e3b1uA1

e3b1uA1

UID: 001760138

PDB

Range: A:294-663
PDB: 3B1U chain A(all domains)
UniProt: Q9UM07 (all domains)
Gene: PADI4

Molecule: Protein-arginine deiminase type-4

3D Structure

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Related Domains

Browse other domains in PAD →

Classification

AArchitecturea+b duplicates or obligate multimers(a.15)

XX-groupPentein(232)

HH-groupPentein(232.1)

TT-groupPentein(232.1.1)

FFamilyPAD(232.1.1.3)

Ligands

in contact, ≤ 4 Å

Calcium ionCA
metal
2-{[(2S)-1-amino-5-{[(1Z)-2-fluoroethanimidoyl]amino}-1-oxopentan-2-yl]carbamoyl}benzoic acidYFF

+ 1 additive (Sulfate ion)

Sulfate ionSO4

Pfam Families

Protein-arginine deiminase (PAD)

ClanCL0197GME

External Links

ECOD PDB View: 3B1U RCSB PDB: 3B1U PDBe: 3B1U UniProt: Q9UM07

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.