ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3swrA1 - ECOD Domain | ECOD

ECOD/Domains/e3swrA1

e3swrA1

UID: 001813258

PDB

Range: A:1129-1439,A:1518-1600
PDB: 3SWR chain A(all domains)
UniProt: P26358 (all domains)
Gene: DNMT1

Molecule: DNA (cytosine-5)-methyltransferase 1

3D Structure

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Related Domains

Browse other domains in DNA_methylase →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupS-adenosyl-L-methionine-dependent methyltransferases(2003.1.5)

FFamilyDNA_methylase(2003.1.5.1)

Ligands

in contact, ≤ 4 Å

SinefunginSFG
drugDrugBank DB01910

+ 3 additives (Sulfate ion, 1,2-ETHANEDIOL, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID)

Sulfate ionSO4
DrugBank DB14546

Pfam Families

PF00145DNA_methylase

C-5 cytosine-specific DNA methylase

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 3SWR RCSB PDB: 3SWR PDBe: 3SWR UniProt: P26358

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

1,2-ETHANEDIOL

2-(N-MORPHOLINO)-ETHANESULFONIC ACIDMES

Shown in the structure viewer. Drug annotations from DrugDomain.