ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5lvnA1 - ECOD Domain | ECOD

ECOD/Domains/e5lvnA1

e5lvnA1

UID: 001892001

PDB

Range: A:75-359
PDB: 5LVN chain A(all domains)
UniProt: O15530 (all domains)
Gene: PDPK1

Molecule: 3-phosphoinositide-dependent protein kinase 1

3D Structure

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Related Domains

Browse other domains in Pkinase →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupProtein kinase/SAICAR synthase/ATP-grasp(206)

HH-groupProtein kinase/SAICAR synthase/ATP-grasp(206.1)

TT-groupProtein kinase(206.1.1)

FFamilyPkinase(206.1.1.1)

Ligands

in contact, ≤ 4 Å

AdenosineADN
drugDrugBank DB00640within 5 Å only
(4R,5R)-1,2-dithiane-4,5-diolDTD
drugDrugBank DB01822within 5 Å only

Pfam Families

PF00069Pkinase

Protein kinase domain

ClanCL0016PKinase

External Links

ECOD PDB View: 5LVN RCSB PDB: 5LVN PDBe: 5LVN UniProt: O15530

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Chloride ionCL

within 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.