ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e5vjaB1 - ECOD Domain | ECOD

ECOD/Domains/e5vjaB1

e5vjaB1

UID: 002390414

PDB

Range: B:7-278
PDB: 5VJA chain B(all domains)
UniProt: O43293 (all domains)
Gene: DAPK3

Molecule: Death-associated protein kinase 3

3D Structure

Loading viewer...

Related Domains

Browse other domains in Pkinase →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupProtein kinase/SAICAR synthase/ATP-grasp(206)

HH-groupProtein kinase/SAICAR synthase/ATP-grasp(206.1)

TT-groupProtein kinase(206.1.1)

FFamilyPkinase(206.1.1.1)

Ligands

in contact, ≤ 4 Å

IsoleucineILE
drugDrugBank DB00167within 5 Å only
(2R)-2-{[1-(3-chlorophenyl)-4-oxo-4,5-dihydro-1H-pyrazolo[3,4-d]pyrimidin-6-yl]sulfanyl}propanamideDUK

+ 1 additive (Dimethyl sulfoxide)

Pfam Families

PF00069Pkinase

Protein kinase domain

ClanCL0016PKinase

External Links

ECOD PDB View: 5VJA RCSB PDB: 5VJA PDBe: 5VJA UniProt: O43293

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Dimethyl sulfoxideDMS

DrugBank DB01093

Shown in the structure viewer. Drug annotations from DrugDomain.