ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1p62B1 - ECOD Domain | ECOD

ECOD/Domains/e1p62B1

e1p62B1

UID: 000100854

PDB

Range: B:20-260
PDB: 1P62 chain B(all domains)
UniProt: P27707 (all domains)
Gene: DCK

Molecule: Deoxycytidine kinase

3D Structure

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Related Domains

Browse other domains in dNK →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupP-loop domains-like(2004)

HH-groupP-loop domains-related(2004.1)

TT-groupP-loop containing nucleoside triphosphate hydrolases(2004.1.1)

FFamilydNK(2004.1.1.70)

Ligands

in contact, ≤ 4 Å

Adenosine disphosphateADP
drugDrugBank DB16833
GemcitabineGEO
drugDrugBank DB00441
Magnesium ion

Pfam Families

Deoxynucleoside kinase

ClanCL0023P-loop_NTPase

External Links

ECOD PDB View: 1P62 RCSB PDB: 1P62 PDBe: 1P62 UniProt: P27707

Downloads

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metal

Shown in the structure viewer. Drug annotations from DrugDomain.