ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1vgyA2 - ECOD Domain | ECOD

ECOD/Domains/e1vgyA2

e1vgyA2

UID: 000010164

RepresentativePDB

Range: A:2-180,A:294-376
PDB: 1VGY chain A(all domains)
UniProt: Q9JYL2 (all domains)
Gene: dapE

Molecule: Succinyl-diaminopimelate desuccinylase (SDAP desuccinylase) (EC 3.5.1.18) (N-succinyl-LL-2,6-diaminoheptanedioate amidohydrolase)

3D Structure

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Related Domains

Browse other domains in Peptidase_M20 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupPhosphorylase/hydrolase-like(2011)

HH-groupZn-dependent exopeptidases(2011.1)

TT-groupZn-dependent exopeptidases(2011.1.1)

FFamilyPeptidase_M20(2011.1.1.6)

Pfam Families

PF01546Peptidase_M20

Peptidase family M20/M25/M40

ClanCL0865ZnExoPePases

External Links

ECOD PDB View: 1VGY RCSB PDB: 1VGY PDBe: 1VGY UniProt: Q9JYL2

Downloads

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