ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2j08A2 - ECOD Domain | ECOD

ECOD/Domains/e2j08A2

e2j08A2

UID: 000103025

PDB

Range: A:2-171
PDB: 2J08 chain A(all domains)
UniProt: P61497 (all domains)
Gene: phr

Molecule: DEOXYRIBODIPYRIMIDINE PHOTO-LYASE

3D Structure

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Related Domains

Browse other domains in DNA_photolyase →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupHUP domain-like(2005)

HH-groupHUP domains(2005.1)

TT-groupHUP domains(2005.1.1)

FFamilyDNA_photolyase(2005.1.1.9)

Ligands

in contact, ≤ 4 Å

Chloride ionCL
1-DEOXY-1-(8-IODO-7-METHYL-2,4-DIOXO-3,4-DIHYDROBENZO[G]PTERIDIN-10(2H)-YL)-D-RIBITOLIRF

+ 1 additive (Phosphate ion)

Phosphate ionPO4

Pfam Families

PF00875DNA_photolyase

DNA photolyase

ClanCL0039HUP

External Links

ECOD PDB View: 2J08 RCSB PDB: 2J08 PDBe: 2J08 UniProt: P61497

Downloads

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DrugBank DB14523

Shown in the structure viewer. Drug annotations from DrugDomain.