ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3ze6B2 - ECOD Domain | ECOD

ECOD/Domains/e3ze6B2

e3ze6B2

UID: 001030305

PDB

Range: B:97-275,B:325-405
PDB: 3ZE6 chain B(all domains)
UniProt: Q72AS3 (all domains)
Gene: hysA

Molecule: PERIPLASMIC [NIFESE] HYDROGENASE, LARGE SUBUNIT, SELENOCYS SELENOCYSTEINE-CONTAINING

3D Structure

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Related Domains

Browse other domains in NiFeSe_Hases →

Classification

AArchitecturealpha complex topology(a.10)

XX-groupalpha-helical domain in nickel-iron hydrogenase, large subunit(4025)

HH-groupalpha-helical domain in nickel-iron hydrogenase, large subunit(4025.1)

TT-groupalpha-helical domain in nickel-iron hydrogenase, large subunit(4025.1.1)

FFamilyNiFeSe_Hases(4025.1.1.2)

Ligands

in contact, ≤ 4 Å

Chloride ionCL
BIS-(MU-2-OXO),[(MU-3--SULFIDO)-BIS(MU-2--SULFIDO)-TRIS(CYS-S)-TRI-IRON] (AQUA)(GLU-O)IRON(II)FSX
3-[DODECYL(DIMETHYL)AMMONIO]PROPANE-1-SULFONATESBY

Pfam Families

PF00374NiFeSe_Hases

Nickel-dependent hydrogenase

External Links

ECOD PDB View: 3ZE6 RCSB PDB: 3ZE6 PDBe: 3ZE6 UniProt: Q72AS3

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Iron/sulfur clusterSF4

CARBONMONOXIDE-(DICYANO) IRONFCO

within 5 Å only

+ 1 additive (Glycerin)

GlycerinGOL
DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.