ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3sy2B1 - ECOD Domain | ECOD

ECOD/Domains/e3sy2B1

e3sy2B1

UID: 001032211

PDB

Range: B:165-336
PDB: 3SY2 chain B(all domains)
UniProt: Q8ZNR3 (all domains)
Gene: sopA

Molecule: E3 ubiquitin-protein ligase SopA (EC 2.3.2.26) (HECT-type E3 ubiquitin transferase SopA) (Salmonella outer protein A) (Secreted effector protein SopA)

3D Structure

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Related Domains

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Classification

AArchitecturebeta duplicates or obligate multimers(a.4)

XX-groupSingle-stranded right-handed beta-helix(207)

HH-groupPentapeptide repeats(207.9)

TT-groupPentapeptide repeats(207.9.1)

FFamilyPentapeptide(207.9.1.1)

Pfam Families

PF00805Pentapeptide

Pentapeptide repeats (8 copies)

ClanCL0505Pentapeptide

External Links

ECOD PDB View: 3SY2 RCSB PDB: 3SY2 PDBe: 3SY2 UniProt: Q8ZNR3

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