ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e2d5uA1 - ECOD Domain | ECOD

ECOD/Domains/e2d5uA1

e2d5uA1

UID: 001033426

PDB

Range: A:1-124
PDB: 2D5U chain A(all domains)
UniProt: Q9JI78 (all domains)
Gene: Ngly1

Molecule: Peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase (PNGase) (mPNGase) (EC 3.5.1.52) (N-glycanase 1) (Peptide:N-glycanase)

3D Structure

Loading viewer...

Related Domains

Browse other domains in PUB →

Classification

AArchitecturea+b two layers(a.11)

XX-groupR3H domain-like(320)

HH-groupPUB domain(320.4)

TT-groupPUB domain(320.4.1)

FFamilyPUB(320.4.1.3)

Pfam Families

PUB domain

External Links

ECOD PDB View: 2D5U RCSB PDB: 2D5U PDBe: 2D5U UniProt: Q9JI78

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure