ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3kemB1 - ECOD Domain | ECOD

ECOD/Domains/e3kemB1

e3kemB1

UID: 001036386

PDB

Range: B:1-95
PDB: 3KEM chain B(all domains)
UniProt: P62623 (all domains)
Gene: ispH

Molecule: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase

3D Structure

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Related Domains

Browse other domains in LYTB →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupNadA-like/4-hydroxy-3-methylbut-2-enyl diphosphate reductase(7588)

HH-groupNadA-like/4-hydroxy-3-methylbut-2-enyl diphosphate reductase(7588.1)

TT-groupNadA-like/4-hydroxy-3-methylbut-2-enyl diphosphate reductase(7588.1.1)

FFamilyLYTB(7588.1.1.1)

Ligands

in contact, ≤ 4 Å

ISOPENTENYL PYROPHOSPHATEIPE
drugDrugBank DB04714
FE3-S4 CLUSTERF3S

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

LytB protein

External Links

ECOD PDB View: 3KEM RCSB PDB: 3KEM PDBe: 3KEM UniProt: P62623

Downloads

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