ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e4boqA1 - ECOD Domain | ECOD

ECOD/Domains/e4boqA1

e4boqA1

UID: 001066320

PDB

Range: A:135-309
PDB: 4BOQ chain A(all domains)
UniProt: Q5VVQ6 (all domains)
Gene: YOD1

Molecule: Ubiquitin thioesterase OTU1 (EC 3.4.19.12) (DUBA-8) (HIV-1-induced protease 7) (HIN-7) (HsHIN7) (OTU domain-containing protein 2)

3D Structure

Loading viewer...

Related Domains

Browse other domains in OTU →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupCysteine proteinases-like(219)

HH-groupCysteine proteinases(219.1)

TT-groupCysteine proteinases(219.1.1)

FFamilyOTU(219.1.1.15)

Pfam Families

OTU-like cysteine protease

ClanCL0125Peptidase_CA

External Links

ECOD PDB View: 4BOQ RCSB PDB: 4BOQ PDBe: 4BOQ UniProt: Q5VVQ6

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure