ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4jk6A1 - ECOD Domain | ECOD

ECOD/Domains/e4jk6A1

e4jk6A1

UID: 001066943

PDB

Range: A:16-242
PDB: 4JK6 chain A(all domains)
UniProt: P00749 (all domains)
Gene: PLAU

Molecule: Urokinase-type plasminogen activator

3D Structure

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Related Domains

Browse other domains in Trypsin →

Classification

AArchitecturebeta barrels(a.1)

XX-groupcradle loop barrel(1)

HH-groupRIFT-related(1.1)

TT-groupFMN-binding split barrel 2(1.1.17)

FFamilyTrypsin(1.1.17.1)

Ligands

in contact, ≤ 4 Å

Chloride ionCL
Hexaethylene glycolP6G
1,3,5-tris(bromomethyl)benzeneZBR

Pfam Families

PF00089Trypsin

Trypsin

ClanCL0124Peptidase_PA

External Links

ECOD PDB View: 4JK6 RCSB PDB: 4JK6 PDBe: 4JK6 UniProt: P00749

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

+ 1 additive (Sulfate ion)

Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.