ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1yp4C2 - ECOD Domain | ECOD

ECOD/Domains/e1yp4C2

e1yp4C2

UID: 000107137

PDB

Range: C:11-316
PDB: 1YP4 chain C(all domains)
UniProt: P23509 (all domains)

Molecule: Glucose-1-phosphate adenylyltransferase small subunit

3D Structure

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Related Domains

Browse other domains in NTP_transferase →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupNucleotide-diphospho-sugar transferases(7516)

HH-groupNucleotide-diphospho-sugar transferases(7516.1)

TT-groupNucleotide-diphospho-sugar transferases(7516.1.1)

FFamilyNTP_transferase(7516.1.1.1)

Ligands

in contact, ≤ 4 Å

Adenosine disphosphateADP
drugDrugBank DB16833

+ 1 additive (Sulfate ion)

Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer.

Pfam Families

PF00483NTP_transferase

Nucleotidyl transferase

ClanCL0110GT-A

External Links

ECOD PDB View: 1YP4 RCSB PDB: 1YP4 PDBe: 1YP4 UniProt: P23509

Downloads

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Drug annotations from DrugDomain.