ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e4jykA2 - ECOD Domain | ECOD

ECOD/Domains/e4jykA2

e4jykA2

UID: 001088684

PDB

Range: A:12-88
PDB: 4JYK chain A(all domains)
UniProt: P0ACU2 (all domains)
Gene: rutR

Molecule: HTH-type transcriptional regulator RutR

3D Structure

Loading viewer...

Related Domains

Browse other domains in TetR_N →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHTH(101)

HH-groupHTH(101.1)

TT-groupThree-helical HTH(101.1.1)

FFamilyTetR_N(101.1.1.5)

Ligands

in contact, ≤ 4 Å

UracilURA
drugDrugBank DB03419

+ 1 additive (Sulfate ion)

Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer.

Pfam Families

Bacterial regulatory proteins, tetR family

ClanCL0123HTH

External Links

ECOD PDB View: 4JYK RCSB PDB: 4JYK PDBe: 4JYK UniProt: P0ACU2

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Drug annotations from DrugDomain.