ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1x06A1 - ECOD Domain | ECOD

ECOD/Domains/e1x06A1

e1x06A1

UID: 000109295

PDB

Range: A:13-240
PDB: 1X06 chain A(all domains)
UniProt: P60472 (all domains)
Gene: ispU

Molecule: Undecaprenyl pyrophosphate synthetase

3D Structure

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Related Domains

Browse other domains in Prenyltransf →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupUndecaprenyl diphosphate synthase(7534)

HH-groupUndecaprenyl diphosphate synthase(7534.1)

TT-groupUndecaprenyl diphosphate synthase(7534.1.1)

FFamilyPrenyltransf(7534.1.1.1)

Ligands

in contact, ≤ 4 Å

Farnesyl thiopyrophosphateFPS
drugDrugBank DB04695
Magnesium ionMG
metal

+ 1 additive (Phosphate ion)

Pfam Families

PF01255Prenyltransf

Putative undecaprenyl diphosphate synthase

External Links

ECOD PDB View: 1X06 RCSB PDB: 1X06 PDBe: 1X06 UniProt: P60472

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Phosphate ionPO4

DrugBank DB14523

Shown in the structure viewer. Drug annotations from DrugDomain.