ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4lc3A1 - ECOD Domain | ECOD

ECOD/Domains/e4lc3A1

e4lc3A1

UID: 001094956

PDB

Range: A:240-383
PDB: 4LC3 chain A(all domains)
UniProt: B4EB17 (all domains)
Gene: arnB

Molecule: Putative UDP-4-amino-4-deoxy-l-arabinose--oxoglutarate aminotransferase

3D Structure

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Related Domains

Browse other domains in DegT_DnrJ_EryC1 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupC-terminal domain in some PLP-dependent transferases(3016)

HH-groupC-terminal domain in some PLP-dependent transferases(3016.1)

TT-groupC-terminal domain in some PLP-dependent transferases(3016.1.1)

FFamilyDegT_DnrJ_EryC1(3016.1.1.6)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 3 additives (Glycerin, Citric acid, 1,2-ETHANEDIOL)

GlycerinGOL
DrugBank DB09462
Citric acidCIT
DrugBank DB04272within 5 Å only
1,2-ETHANEDIOL

Pfam Families

PF01041DegT_DnrJ_EryC1

DegT/DnrJ/EryC1/StrS aminotransferase family

ClanCL0061PLP_aminotran

External Links

ECOD PDB View: 4LC3 RCSB PDB: 4LC3 PDBe: 4LC3 UniProt: B4EB17

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.