ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4bofF1 - ECOD Domain | ECOD

ECOD/Domains/e4bofF1

e4bofF1

UID: 001096429

PDB

Range: F:3-411
PDB: 4BOF chain F(all domains)
UniProt: P0C0B3 (all domains)
Gene: arcA

Molecule: ARGININE DEIMINASE

3D Structure

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Related Domains

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Classification

AArchitecturea+b duplicates or obligate multimers(a.15)

XX-groupPentein(232)

HH-groupPentein(232.1)

TT-groupPentein(232.1.1)

FFamilyADI(232.1.1.2)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 3 additives (Triethylene glycol, Sulfate ion, Tetraethylene glycol)

Triethylene glycolPGE
DrugBank DB02327
Sulfate ionSO4
DrugBank DB14546
Tetraethylene glycol

Pfam Families

Arginine deiminase

ClanCL0197GME

External Links

ECOD PDB View: 4BOF RCSB PDB: 4BOF PDBe: 4BOF UniProt: P0C0B3

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.