ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3a1mF1 - ECOD Domain | ECOD

ECOD/Domains/e3a1mF1

e3a1mF1

UID: 001097452

PDB

Range: F:17-101
PDB: 3A1M chain F(all domains)
UniProt: P16009 (all domains)
Gene: 5

Molecule: chimera of thrombin cleavage site, Tail-associated lysozyme, Fibritin

3D Structure

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Related Domains

Browse other domains in Gp5_C →

Classification

AArchitecturebeta duplicates or obligate multimers(a.4)

XX-groupPhage tail fiber protein trimerization domain(79)

HH-groupPhage tail fiber protein trimerization domain(79.1)

TT-groupPhage tail fiber protein trimerization domain(79.1.1)

FFamilyGp5_C(79.1.1.1)

Ligands

in contact, ≤ 4 Å

Potassium ionK
metalwithin 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Gp5 C-terminal repeat (3 copies)

ClanCL0606Phage_fibre

External Links

ECOD PDB View: 3A1M RCSB PDB: 3A1M PDBe: 3A1M UniProt: P16009

Downloads

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