ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1hfeM3 - ECOD Domain | ECOD

ECOD/Domains/e1hfeM3

e1hfeM3

UID: 000109864

PDB

Range: M:87-389
PDB: 1HFE chain M(all domains)
UniProt: P07598 (all domains)
Gene: hydA

Molecule: PROTEIN (FE-ONLY HYDROGENASE (E.C.1.18.99.1) (LARGER SUBUNIT))

3D Structure

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Related Domains

Browse other domains in Fe_hyd_lg_C →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupFe-only hydrogenase(7556)

HH-groupFe-only hydrogenase(7556.1)

TT-groupFe-only hydrogenase(7556.1.1)

FFamilyFe_hyd_lg_C(7556.1.1.1)

Ligands

in contact, ≤ 4 Å

Carbon monoxideCMO
drugDrugBank DB11588
CysteineCYS
drugDrugBank DB00151
Cyanide ion

Pfam Families

PF02906Fe_hyd_lg_C

Iron only hydrogenase large subunit, C-terminal domain

External Links

ECOD PDB View: 1HFE RCSB PDB: 1HFE PDBe: 1HFE UniProt: P07598

Downloads

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FE (II) IONFE2

metal

1,3-PROPANEDITHIOLPDT

Iron/sulfur clusterSF4

Shown in the structure viewer. Drug annotations from DrugDomain.