ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3bbdA1 - ECOD Domain | ECOD

ECOD/Domains/e3bbdA1

e3bbdA1

UID: 000010989

RepresentativePDB

Range: A:2-205
PDB: 3BBD chain A(all domains)
UniProt: Q57977 (all domains)
Gene: nep1

Molecule: Ribosomal RNA small subunit methyltransferase Nep1 (EC 2.1.1.-) (16S rRNA (pseudouridine-N1-)-methyltransferase Nep1) (16S rRNA Psi914 methyltransferase)

3D Structure

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Related Domains

Browse other domains in EMG1 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupalpha/beta knot(2488)

HH-groupalpha/beta knot(2488.1)

TT-groupalpha/beta knot(2488.1.1)

FFamilyEMG1(2488.1.1.7)

Pfam Families

EMG1/NEP1 methyltransferase

ClanCL0098SPOUT

External Links

ECOD PDB View: 3BBD RCSB PDB: 3BBD PDBe: 3BBD UniProt: Q57977

Downloads

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