ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1p3dB3 - ECOD Domain | ECOD

ECOD/Domains/e1p3dB3

e1p3dB3

UID: 000110173

PDB

Range: B:322-473
PDB: 1P3D chain B(all domains)
UniProt: P45066 (all domains)
Gene: murC

Molecule: UDP-N-acetylmuramate--alanine ligase

3D Structure

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Related Domains

Browse other domains in Mur_ligase_C →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupMurD-like peptide ligases, peptide-binding domain(7570)

HH-groupMurD-like peptide ligases, peptide-binding domain(7570.1)

TT-groupMurD-like peptide ligases, peptide-binding domain(7570.1.1)

FFamilyMur_ligase_C(7570.1.1.1)

Ligands

in contact, ≤ 4 Å

Uridine-5'-Diphosphate-N-Acetylmuramoyl-L-AlanineUMA
drugDrugBank DB01673
Phosphoaminophosphonic acid-adenylate esterANP
MANGANESE (II) IONMN

Pfam Families

PF02875Mur_ligase_C

Mur ligase, glutamate ligase domain

ClanCL0794Mur_ligase_C_sf

External Links

ECOD PDB View: 1P3D RCSB PDB: 1P3D PDBe: 1P3D UniProt: P45066

Downloads

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metalwithin 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.