ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4lirB1 - ECOD Domain | ECOD

ECOD/Domains/e4lirB1

e4lirB1

UID: 001102592

PDB

Range: B:169-252
PDB: 4LIR chain B(all domains)
UniProt: Q8NFH5 (all domains)
Gene: NUP35

Molecule: Nucleoporin NUP35 (35 kDa nucleoporin) (Mitotic phosphoprotein 44) (MP-44) (Nuclear pore complex protein Nup53) (Nucleoporin NUP53)

3D Structure

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Related Domains

Browse other domains in Nup35_RRM →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupRNA-binding domain, RBD(304.9)

TT-groupRNA-binding domain, RBD(304.9.1)

FFamilyNup35_RRM(304.9.1.11)

Pfam Families

PF05172RRM_Nup35

Nup53/35/40-type RNA recognition motif

ClanCL0221RRM

External Links

ECOD PDB View: 4LIR RCSB PDB: 4LIR PDBe: 4LIR UniProt: Q8NFH5

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