ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2ykoB2 - ECOD Domain | ECOD

ECOD/Domains/e2ykoB2

e2ykoB2

UID: 001106001

PDB

Range: B:154-253
PDB: 2YKO chain B(all domains)
UniProt: Q9UN81 (all domains)
Gene: L1RE1

Molecule: LINE-1 retrotransposable element ORF1 protein (L1ORF1p) (LINE retrotransposable element 1) (LINE1 retrotransposable element 1)

3D Structure

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Related Domains

Browse other domains in Transposase_22 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupRNA-binding domain, RBD(304.9)

TT-groupRNA-binding domain, RBD(304.9.1)

FFamilyTransposase_22(304.9.1.5)

Pfam Families

PF02994Transposase_22

L1 transposable element RBD-like domain

ClanCL0221RRM

External Links

ECOD PDB View: 2YKO RCSB PDB: 2YKO PDBe: 2YKO UniProt: Q9UN81

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