ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4myoB1 - ECOD Domain | ECOD

ECOD/Domains/e4myoB1

e4myoB1

UID: 001107916

PDB

Range: B:6-217
PDB: 4MYO chain B(all domains)
UniProt: P26839 (all domains)
Gene: vat

Molecule: Virginiamycin A acetyltransferase

3D Structure

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Related Domains

Browse other domains in Hexapep →

Classification

AArchitecturebeta duplicates or obligate multimers(a.4)

XX-groupSingle-stranded left-handed beta-helix(208)

HH-groupTrimeric LpxA-like enzymes(208.1)

TT-groupTrimeric LpxA-like enzymes(208.1.1)

FFamilyHexapep(208.1.1.1)

Ligands

in contact, ≤ 4 Å

Chloride ionCL
Magnesium ionMG
metal

+ 1 additive (Sulfate ion)

Sulfate ionSO4

Pfam Families

PF00132Hexapep

Bacterial transferase hexapeptide (six repeats)

ClanCL0536HEXAPEP

External Links

ECOD PDB View: 4MYO RCSB PDB: 4MYO PDBe: 4MYO UniProt: P26839

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.