ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1v11A1 - ECOD Domain | ECOD

ECOD/Domains/e1v11A1

e1v11A1

UID: 000111081

PDB

Range: A:7-288,A:313-400
PDB: 1V11 chain A(all domains)
UniProt: P12694 (all domains)
Gene: BCKDHA

Molecule: 2-OXOISOVALERATE DEHYDROGENASE ALPHA SUBUNIT

3D Structure

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Related Domains

Browse other domains in E1_dh →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupThiamin diphosphate-binding fold (THDP-binding)(7574)

HH-groupThiamin diphosphate-binding fold (THDP-binding)(7574.1)

TT-groupThiamin diphosphate-binding fold (THDP-binding)(7574.1.1)

FFamilyE1_dh(7574.1.1.2)

Ligands

in contact, ≤ 4 Å

BenzamidineBEN
Chloride ionCL
Potassium ionK
metal

Pfam Families

Dehydrogenase E1 component

ClanCL0254THDP-binding

External Links

ECOD PDB View: 1V11 RCSB PDB: 1V11 PDBe: 1V11 UniProt: P12694

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

MANGANESE (II) IONMN

metal

Thiamine diphosphateTPP

within 5 Å only

+ 1 additive (Glycerol)

GlycerolGOL

Shown in the structure viewer. Drug annotations from DrugDomain.