ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4k7gB2 - ECOD Domain | ECOD

ECOD/Domains/e4k7gB2

e4k7gB2

UID: 001115582

PDB

Range: B:159-312
PDB: 4K7G chain B(all domains)
UniProt: B9K4G4 (all domains)
Gene: Avi_7022

Molecule: 3-hydroxyproline dehydratse

3D Structure

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Related Domains

Browse other domains in Pro_racemase →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupDiaminopimelate epimerase-like(286)

HH-groupDiaminopimelate epimerase-like(286.1)

TT-groupDiaminopimelate epimerase-like(286.1.1)

FFamilyPro_racemase(286.1.1.4)

Ligands

in contact, ≤ 4 Å

Pyrrole-2-CarboxylatePYC
drugDrugBank DB02543

+ 2 additives (Acetate, Citric acid)

AcetateACT
DrugBank DB14511

Pfam Families

PF05544Pro_racemase

Proline racemase

ClanCL0288DAP_epimerase

External Links

ECOD PDB View: 4K7G RCSB PDB: 4K7G PDBe: 4K7G UniProt: B9K4G4

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Citric acidCIT

Shown in the structure viewer. Drug annotations from DrugDomain.