ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1y5lB2 - ECOD Domain | ECOD

ECOD/Domains/e1y5lB2

e1y5lB2

UID: 001117312

PDB

Range: B:184-243
PDB: 1Y5L chain B(all domains)
UniProt: P11349 (all domains)
Gene: narH

Molecule: Respiratory nitrate reductase 1 beta chain

3D Structure

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Related Domains

Browse other domains in Fer4_11 →

Classification

AArchitecturea+b two layers(a.11)

XX-group4Fe-4S ferredoxin(205)

HH-group4Fe-4S ferredoxin(205.1)

TT-group4Fe-4S ferredoxin(205.1.1)

FFamilyFer4_11(205.1.1.17)

Ligands

in contact, ≤ 4 Å

FerrohemeHEM
drugDrugBank DB18267
1,2-DIACYL-GLYCEROL-3-SN-PHOSPHATE3PH
FE3-S4 CLUSTERF3S

Pfam Families

PF13247Fer4_11

4Fe-4S dicluster domain

ClanCL03444Fe-4S

External Links

ECOD PDB View: 1Y5L RCSB PDB: 1Y5L PDBe: 1Y5L UniProt: P11349

Downloads

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Iron/sulfur clusterSF4

Shown in the structure viewer. Drug annotations from DrugDomain.