ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1dj9A2 - ECOD Domain | ECOD

ECOD/Domains/e1dj9A2

e1dj9A2

UID: 000111876

PDB

Range: A:2-284
PDB: 1DJ9 chain A(all domains)
UniProt: P12998 (all domains)
Gene: bioF

Molecule: 8-AMINO-7-OXONONANOATE SYNTHASE

3D Structure

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Related Domains

Browse other domains in Aminotran_1_2 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupPLP-dependent transferases(7577)

HH-groupPLP-dependent transferases(7577.1)

TT-groupPLP-dependent transferases(7577.1.1)

FFamilyAminotran_1_2(7577.1.1.1)

Ligands

in contact, ≤ 4 Å

N-Pyridoxyl-7-Keto-8-Aminopelargonic Acid-5'-MonophosphateKAM
drugDrugBank DB03160
Magnesium ionMG
metal

+ 1 additive (Sulfate ion)

Pfam Families

PF00155Aminotran_1_2

Aminotransferase class I and II

ClanCL0061PLP_aminotran

External Links

ECOD PDB View: 1DJ9 RCSB PDB: 1DJ9 PDBe: 1DJ9 UniProt: P12998

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.