ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e3j5qB2 - ECOD Domain | ECOD

ECOD/Domains/e3j5qB2

e3j5qB2

UID: 001122797

PDB

Range: B:416-732
PDB: 3J5Q chain B(all domains)
UniProt: O35433 (all domains)
Gene: Trpv1

Molecule: Transient receptor potential cation channel subfamily V member 1 (TrpV1) (Capsaicin receptor) (Osm-9-like TRP channel 1) (OTRPC1) (Vanilloid receptor 1) (Vanilloid receptor type 1-like)

3D Structure

Loading viewer...

Related Domains

Browse other domains in YVC1_C →

Classification

AArchitecturealpha complex topology(a.10)

XX-groupVoltage-gated ion channels(5054)

HH-groupVoltage-gated ion channels(5054.1)

TT-groupVoltage-gated ion channels(5054.1.1)

FFamilyYVC1_C(5054.1.1.58)

Pfam Families

Calcium channel YVC1-like, C-terminal

ClanCL0030Ion_channel

External Links

ECOD PDB View: 3J5Q RCSB PDB: 3J5Q PDBe: 3J5Q UniProt: O35433

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure