ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4c8mA2 - ECOD Domain | ECOD

ECOD/Domains/e4c8mA2

e4c8mA2

UID: 001124507

PDB

Range: A:423-591
PDB: 4C8M chain A(all domains)
UniProt: P19821 (all domains)
Gene: polA

Molecule: LARGE FRAGMENT OF TAQ DNA POLYMERASE I

3D Structure

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Related Domains

Browse other domains in DNA_pol_A →

Classification

AArchitecturealpha bundles(a.7)

XX-group"fingers" domain in bacteriophage RB69-like DNA polymerase I(4970)

HH-group"fingers" domain in bacteriophage RB69-like DNA polymerase I(4970.1)

TT-group"fingers" domain in bacteriophage RB69-like DNA polymerase I(4970.1.1)

FFamilyDNA_pol_A(4970.1.1.2)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 2 additives (Glycerin, Sulfate ion)

GlycerinGOL
DrugBank DB09462
Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00476DNA_pol_A

DNA polymerase family A

External Links

ECOD PDB View: 4C8M RCSB PDB: 4C8M PDBe: 4C8M UniProt: P19821

Downloads

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