ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e4nkgA1 - ECOD Domain | ECOD

ECOD/Domains/e4nkgA1

e4nkgA1

UID: 001124908

RepresentativePDB

Range: A:162-394
PDB: 4NKG chain A(all domains)
UniProt: D0ZVG2 (all domains)
Gene: sspH1

Molecule: E3 ubiquitin-protein ligase SspH1 (EC 2.3.2.27) (RING-type E3 ubiquitin transferase SspH1) (Salmonella secreted protein H1) (Secreted effector protein SspH1)

3D Structure

Loading viewer...

Related Domains

Browse other domains in LRR_1 →

Classification

AArchitecturebeta duplicates or obligate multimers(a.4)

XX-groupSingle-stranded right-handed beta-helix(207)

HH-groupLeucine-rich repeats(207.1)

TT-groupLeucine-rich repeats(207.1.1)

FFamilyLRR_1(207.1.1.1)

Pfam Families

Leucine Rich Repeat

ClanCL0022LRR

External Links

ECOD PDB View: 4NKG RCSB PDB: 4NKG PDBe: 4NKG UniProt: D0ZVG2

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure