ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4nkhB1 - ECOD Domain | ECOD

ECOD/Domains/e4nkhB1

e4nkhB1

UID: 001124912

RepresentativePDB

Range: B:162-398
PDB: 4NKH chain B(all domains)
UniProt: D0ZVG2 (all domains)
Gene: sspH1

Molecule: E3 ubiquitin-protein ligase SspH1 (EC 2.3.2.27) (RING-type E3 ubiquitin transferase SspH1) (Salmonella secreted protein H1) (Secreted effector protein SspH1)

3D Structure

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Related Domains

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Classification

AArchitecturebeta duplicates or obligate multimers(a.4)

XX-groupSingle-stranded right-handed beta-helix(207)

HH-groupLeucine-rich repeats(207.1)

TT-groupLeucine-rich repeats(207.1.1)

FFamilyLRR_1(207.1.1.1)

Pfam Families

Leucine Rich Repeat

ClanCL0022LRR

External Links

ECOD PDB View: 4NKH RCSB PDB: 4NKH PDBe: 4NKH UniProt: D0ZVG2

Downloads

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