ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3zfkB1 - ECOD Domain | ECOD

ECOD/Domains/e3zfkB1

e3zfkB1

UID: 001125139

PDB

Range: B:450-573
PDB: 3ZFK chain B(all domains)
UniProt: Q47112 (all domains)
Gene: colE7

Molecule: COLICIN-E7

3D Structure

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Related Domains

Browse other domains in Col-Pyo_DNase →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupHis-Me finger endonucleases(378)

HH-groupHis-Me finger endonucleases(378.1)

TT-groupHis-Me finger endonucleases(378.1.1)

FFamilyCol-Pyo_DNase(378.1.1.15)

Ligands

in contact, ≤ 4 Å

Chloride ionCL
Zinc ionZN
metal

+ 2 additives (Acetate, Sulfate ion)

AcetateACT

Pfam Families

PF21431Col-Pyo_DNase

Colicin/Pyocin-S2, DNase domain

ClanCL0263His-Me_finger

External Links

ECOD PDB View: 3ZFK RCSB PDB: 3ZFK PDBe: 3ZFK UniProt: Q47112

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB14511

Sulfate ionSO4

DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.