ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3buiA4 - ECOD Domain | ECOD

ECOD/Domains/e3buiA4

e3buiA4

UID: 001128049

PDB

Range: A:646-928
PDB: 3BUI chain A(all domains)
UniProt: Q24451 (all domains)
Gene: alpha-Man-IIa

Molecule: Alpha-mannosidase 2

3D Structure

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Related Domains

Browse other domains in Glyco_hydro_38C →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupGlycosyl hydrolase domain-like(12)

HH-groupsupersandwich(12.3)

TT-groupsupersandwich(12.3.1)

FFamilyGlyco_hydro_38C(12.3.1.13)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 2 additives ((4r)-2-Methylpentane-2,4-Diol, Tromethamine)

(4r)-2-Methylpentane-2,4-DiolMPD
DrugBank DB03564within 5 Å only
TromethamineTRS
DrugBank DB03754

Pfam Families

PF07748Glyco_hydro_38C

Glycosyl hydrolases family 38 C-terminal domain

ClanCL0103Gal_mutarotase

External Links

ECOD PDB View: 3BUI RCSB PDB: 3BUI PDBe: 3BUI UniProt: Q24451

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

within 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.