ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1sqfA3 - ECOD Domain | ECOD

ECOD/Domains/e1sqfA3

e1sqfA3

UID: 001131168

PDB

Range: A:145-231
PDB: 1SQF chain A(all domains)
UniProt: P36929 (all domains)
Gene: rsmB

Molecule: Ribosomal RNA small subunit methyltransferase B (EC 2.1.1.176) (16S rRNA m5C967 methyltransferase) (rRNA (cytosine-C(5)-)-methyltransferase RsmB)

3D Structure

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Related Domains

Browse other domains in RsmF-B_ferredox →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupNOL1/NOP2/sun N-terminal ferredoxin-like domain(304.137)

TT-groupNOL1/NOP2/sun N-terminal ferredoxin-like domain(304.137.1)

FFamilyRsmF-B_ferredox(304.137.1.3)

Pfam Families

PF22458RsmF-B_ferredox

Methyltr_RsmF/B-like, ferredoxin-like domain

ClanCL0795NSUN_ferredox

External Links

ECOD PDB View: 1SQF RCSB PDB: 1SQF PDBe: 1SQF UniProt: P36929

Downloads

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