ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4durB1 - ECOD Domain | ECOD

ECOD/Domains/e4durB1

e4durB1

UID: 001139507

PDB

Range: B:547-791
PDB: 4DUR chain B(all domains)
UniProt: P00747 (all domains)
Gene: PLG

Molecule: Plasminogen

3D Structure

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Related Domains

Browse other domains in Trypsin →

Classification

AArchitecturebeta barrels(a.1)

XX-groupcradle loop barrel(1)

HH-groupRIFT-related(1.1)

TT-groupFMN-binding split barrel 2(1.1.17)

FFamilyTrypsin(1.1.17.1)

Ligands

in contact, ≤ 4 Å

Chloride ionCL

+ 1 additive (Bicarbonate ion)

Bicarbonate ionBCT

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00089Trypsin

Trypsin

ClanCL0124Peptidase_PA

External Links

ECOD PDB View: 4DUR RCSB PDB: 4DUR PDBe: 4DUR UniProt: P00747

Downloads

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