ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1vhkD1 - ECOD Domain | ECOD

ECOD/Domains/e1vhkD1

e1vhkD1

UID: 000113969

PDB

Range: D:74-253
PDB: 1VHK chain D(all domains)
UniProt: P54461 (all domains)
Gene: rsmE

Molecule: Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.193) (16S rRNA m3U1498 methyltransferase)

3D Structure

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Related Domains

Browse other domains in Methyltrans_RNA →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupalpha/beta knot(2488)

HH-groupalpha/beta knot(2488.1)

TT-groupalpha/beta knot(2488.1.1)

FFamilyMethyltrans_RNA(2488.1.1.12)

Pfam Families

PF04452Methyltrans_RNA

RNA methyltransferase domain

ClanCL0098SPOUT

External Links

ECOD PDB View: 1VHK RCSB PDB: 1VHK PDBe: 1VHK UniProt: P54461

Downloads

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