ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4c0oC1 - ECOD Domain | ECOD

ECOD/Domains/e4c0oC1

e4c0oC1

UID: 001140574

PDB

Range: C:116-211
PDB: 4C0O chain C(all domains)
UniProt: Q07955 (all domains)
Gene: SRSF1

Molecule: Serine/arginine-rich splicing factor 1 (Alternative-splicing factor 1) (ASF-1) (Splicing factor, arginine/serine-rich 1) (pre-mRNA-splicing factor SF2, P33 subunit)

3D Structure

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Related Domains

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Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupRNA-binding domain, RBD(304.9)

TT-groupRNA-binding domain, RBD(304.9.1)

FFamilyRRM_1(304.9.1.1)

Pfam Families

RNA recognition motif

ClanCL0221RRM

External Links

ECOD PDB View: 4C0O RCSB PDB: 4C0O PDBe: 4C0O UniProt: Q07955

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