ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1yjbA1 - ECOD Domain | ECOD

ECOD/Domains/e1yjbA1

e1yjbA1

UID: 000114082

PDB

Range: A:1-275
PDB: 1YJB chain A(all domains)
UniProt: P00782 (all domains)
Gene: apr

Molecule: SUBTILISIN 8397+1

3D Structure

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Related Domains

Browse other domains in Peptidase_S8 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupSubtilisin-like(2499)

HH-groupSubtilisin-like(2499.1)

TT-groupSubtilisin-like(2499.1.1)

FFamilyPeptidase_S8(2499.1.1.1)

Ligands

in contact, ≤ 4 Å

Calcium ionCA
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00082Peptidase_S8

Subtilase family

External Links

ECOD PDB View: 1YJB RCSB PDB: 1YJB PDBe: 1YJB UniProt: P00782

Downloads

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