ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4c3oC2 - ECOD Domain | ECOD

ECOD/Domains/e4c3oC2

e4c3oC2

UID: 001142179

PDB

Range: C:96-335,C:408-490
PDB: 4C3O chain C(all domains)
UniProt: Q8ZPH0 (all domains)
Gene: STM1538

Molecule: HYDROGENASE-1 LARGE SUBUNIT

3D Structure

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Related Domains

Browse other domains in NiFeSe_Hases →

Classification

AArchitecturealpha complex topology(a.10)

XX-groupalpha-helical domain in nickel-iron hydrogenase, large subunit(4025)

HH-groupalpha-helical domain in nickel-iron hydrogenase, large subunit(4025.1)

TT-groupalpha-helical domain in nickel-iron hydrogenase, large subunit(4025.1.1)

FFamilyNiFeSe_Hases(4025.1.1.2)

Ligands

in contact, ≤ 4 Å

Chloride ionCL
FE3-S4 CLUSTERF3S
FE4-S3 CLUSTERF4S

Shown in the structure viewer.

Pfam Families

PF00374NiFeSe_Hases

Nickel-dependent hydrogenase

External Links

ECOD PDB View: 4C3O RCSB PDB: 4C3O PDBe: 4C3O UniProt: Q8ZPH0

Downloads

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Drug annotations from DrugDomain.