ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2fd4A1 - ECOD Domain | ECOD

ECOD/Domains/e2fd4A1

e2fd4A1

UID: 001144163

RepresentativePDB

Range: A:435A-454,A:461-553
PDB: 2FD4 chain A(all domains)
UniProt: Q8RSY1 (all domains)
Gene: hopAB2

Molecule: Effector protein HopAB2 (Avirulence protein AvrPtoB) [Includes: E3 ubiquitin-protein ligase (EC 2.3.2.-) (E3 ubiquitin-protein transferase)]

3D Structure

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Related Domains

Browse other domains in AvrPtoB-E3_ubiq →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupRING/U-box-like(376)

HH-groupRING/U-box-like(376.1)

TT-groupRING/U-box(376.1.1)

FFamilyAvrPtoB-E3_ubiq(376.1.1.13)

Pfam Families

PF09046AvrPtoB-E3_ubiq

AvrPtoB E3 ubiquitin ligase

External Links

ECOD PDB View: 2FD4 RCSB PDB: 2FD4 PDBe: 2FD4 UniProt: Q8RSY1

Downloads

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