ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4aknC2 - ECOD Domain | ECOD

ECOD/Domains/e4aknC2

e4aknC2

UID: 001149202

PDB

Range: C:76-182
PDB: 4AKN chain C(all domains)
UniProt: P25440 (all domains)
Gene: BRD2

Molecule: BROMODOMAIN-CONTAINING PROTEIN 2

3D Structure

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Related Domains

Browse other domains in Bromodomain →

Classification

AArchitecturealpha bundles(a.7)

XX-groupBromodomain-like(633)

HH-groupBromodomain(633.1)

TT-groupBromodomain(633.1.1)

FFamilyBromodomain(633.1.1.1)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 2 additives (Dimethyl sulfoxide, Sulfate ion)

Dimethyl sulfoxideDMS
DrugBank DB01093
Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00439Bromodomain

Bromodomain

External Links

ECOD PDB View: 4AKN RCSB PDB: 4AKN PDBe: 4AKN UniProt: P25440

Downloads

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