ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3gb5A2 - ECOD Domain | ECOD

ECOD/Domains/e3gb5A2

e3gb5A2

UID: 001150473

PDB

Range: A:68-285
PDB: 3GB5 chain A(all domains)
UniProt: Q9DCX8 (all domains)
Gene: Iyd

Molecule: Iodotyrosine dehalogenase 1

3D Structure

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Related Domains

Browse other domains in Nitroreductase →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupFMN-dependent nitroreductase-like(304.103)

TT-groupFMN-dependent nitroreductase-like(304.103.1)

FFamilyNitroreductase(304.103.1.1)

Ligands

in contact, ≤ 4 Å

Flavin mononucleotideFMN
drugDrugBank DB03247

+ 2 additives (Acetate, Phosphate ion)

AcetateACT
DrugBank DB14511

Pfam Families

PF00881Nitroreductase

Nitroreductase family

ClanCL0529FMN-dep-NRtase

External Links

ECOD PDB View: 3GB5 RCSB PDB: 3GB5 PDBe: 3GB5 UniProt: Q9DCX8

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Phosphate ion

DrugBank DB14523

Shown in the structure viewer. Drug annotations from DrugDomain.