ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e2p5gD4 - ECOD Domain | ECOD

ECOD/Domains/e2p5gD4

e2p5gD4

UID: 000115132

PDB

Range: D:2-375
PDB: 2P5G chain D(all domains)
UniProt: Q38087 (all domains)
Gene: 43

Molecule: DNA-directed DNA polymerase (EC 2.7.7.7) (EC 3.1.11.-) (Gp43)

3D Structure

Loading viewer...

Related Domains

Browse other domains in DNA_pol_B_exo1 →

Classification

AArchitecturemixed a+b and a/b(a.18)

XX-groupRibonuclease H-like(2484)

HH-groupRibonuclease H-like(2484.1)

TT-groupRibonuclease H-like(2484.1.1)

FFamilyDNA_pol_B_exo1(2484.1.1.34)

Pfam Families

PF03104DNA_pol_B_exo1

DNA polymerase family B, exonuclease domain

ClanCL0219RNase_H

External Links

ECOD PDB View: 2P5G RCSB PDB: 2P5G PDBe: 2P5G UniProt: Q38087

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure