ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4glwA2 - ECOD Domain | ECOD

ECOD/Domains/e4glwA2

e4glwA2

UID: 001154907

PDB

Range: A:2-7,A:37-305
PDB: 4GLW chain A(all domains)
UniProt: C1CKI0 (all domains)
Gene: ligA

Molecule: DNA ligase

3D Structure

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Related Domains

Browse other domains in DNA_ligase_aden →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupProtein kinase/SAICAR synthase/ATP-grasp(206)

HH-groupProtein kinase/SAICAR synthase/ATP-grasp(206.1)

TT-groupATP-grasp(206.1.3)

FFamilyDNA_ligase_aden(206.1.3.5)

Ligands

in contact, ≤ 4 Å

Nicotinamide MononucleotideNMN
drugDrugBank DB03227within 5 Å only
7-methoxy-6-methylpteridine-2,4-diamine0XT

+ 1 additive (Sulfate ion)

Pfam Families

PF01653DNA_ligase_aden

NAD-dependent DNA ligase adenylation domain

ClanCL0179ATP-grasp

External Links

ECOD PDB View: 4GLW RCSB PDB: 4GLW PDBe: 4GLW UniProt: C1CKI0

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Sulfate ion

DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.