ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1ja8A4 - ECOD Domain | ECOD

ECOD/Domains/e1ja8A4

e1ja8A4

UID: 001156078

PDB

Range: A:1-83
PDB: 1JA8 chain A(all domains)
UniProt: P04179 (all domains)
Gene: SOD2

Molecule: Manganese Superoxide Dismutase

3D Structure

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Related Domains

Browse other domains in Sod_Fe_N →

Classification

AArchitecturealpha bundles(a.7)

XX-groupLong alpha-hairpin(192)

HH-groupFe,Mn superoxide dismutase (SOD), N-terminal domain(192.3)

TT-groupFe,Mn superoxide dismutase (SOD), N-terminal domain(192.3.1)

FFamilySod_Fe_N(192.3.1.1)

Ligands

in contact, ≤ 4 Å

MANGANESE (II) IONMN
metal

+ 1 additive (Sulfate ion)

Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00081Sod_Fe_N

Iron/manganese superoxide dismutases, alpha-hairpin domain

External Links

ECOD PDB View: 1JA8 RCSB PDB: 1JA8 PDBe: 1JA8 UniProt: P04179

Downloads

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