ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3gdeA5 - ECOD Domain | ECOD

ECOD/Domains/e3gdeA5

e3gdeA5

UID: 001159072

PDB

Range: A:216-421
PDB: 3GDE chain A(all domains)
UniProt: O29632 (all domains)
Gene: lig

Molecule: DNA ligase (EC 6.5.1.1) (Polydeoxyribonucleotide synthase [ATP])

3D Structure

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Related Domains

Browse other domains in DNA_ligase_A_M →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupProtein kinase/SAICAR synthase/ATP-grasp(206)

HH-groupProtein kinase/SAICAR synthase/ATP-grasp(206.1)

TT-groupATP-grasp(206.1.3)

FFamilyDNA_ligase_A_M(206.1.3.1)

Pfam Families

PF01068DNA_ligase_A_M

ATP dependent DNA ligase domain

ClanCL0179ATP-grasp

External Links

ECOD PDB View: 3GDE RCSB PDB: 3GDE PDBe: 3GDE UniProt: O29632

Downloads

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